The goal of this project is to add new functionalities to Newt to be able to create biological maps in GPML format from scratch or edit existing...

BEELINE is a bench marking tool that evaluates different methods and models that infer Gene Regulatory Networks (GRN) from Single cell gene...

Project mainly focuses on automating image deployment to an EC2 instance via an AWS DevOps pipeline. Key tasks involve setting up an AWS account with...

The project aims to develop a robust pipeline for assessing the performance of foundation models, specifically focusing on scGPT, in generating...

This project proposes the development of a Python web application that utilizes Large Language Models (LLMs) for extracting, transforming, and...

The goal is developing an updated workflow that uses the existing iGEM distribution structure to integrate a synthesizability assessment of genetic...

MaREA4Galaxy is a user-friendly tool designed to facilitate the characterization and graphical comparison of sample groups exhibiting distinct...

OpenPIP platform is typically necessary alongside a research paper detailing experimental data, alongside depositing the data into a standard...

This project aims to enhance the accessibility and usability of the ASCETIC framework, which interprets tumor evolutionary signatures crucial for...

Cytoscape Desktop Application serves as a powerful tool for network analysis and visualization. However, its layout options are limited compared to...

In this proposal, I explain the machine learning support I aim to implement to generate SBGN maps. I am planning to make an API connection to a...